Python in Medicine and Patient Care
Episode #470,
published Fri, Jul 12, 2024, recorded Sun, Jun 23, 2024
Python is special. It's used by the big tech companies but also by those you would rarely classify as developers. On this episode, we get a look inside how Python is being used at a Children's Hospital to speed and improve patient care. We have Dr. Somak Roy here to share how he's using Python in his day to day job to help kids get well a little bit faster.
Links from the show
Links from the show
Somak Roy: linkedin.com
Cincinnati Children's Hospital: cincinnatichildrens.org
CNVkit: Genome-wide copy number: readthedocs.io
cnaplotr: github.com
hgvs: readthedocs.io
openpyxl: readthedocs.io
Hera is an Argo Python SDK: github.com
insiM: in silico Mutator software for bioinformatics: github.com
Bamsurgeon: github.com
pysam - An interface for reading and writing SAM files: readthedocs.io
Scientists rename human genes to stop Microsoft Excel from misreading them as dates: theverge.com
BioPython: biopython.org
Watch this episode on YouTube: youtube.com
Episode transcripts: talkpython.fm
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Cincinnati Children's Hospital: cincinnatichildrens.org
CNVkit: Genome-wide copy number: readthedocs.io
cnaplotr: github.com
hgvs: readthedocs.io
openpyxl: readthedocs.io
Hera is an Argo Python SDK: github.com
insiM: in silico Mutator software for bioinformatics: github.com
Bamsurgeon: github.com
pysam - An interface for reading and writing SAM files: readthedocs.io
Scientists rename human genes to stop Microsoft Excel from misreading them as dates: theverge.com
BioPython: biopython.org
Watch this episode on YouTube: youtube.com
Episode transcripts: talkpython.fm
--- Stay in touch with us ---
Subscribe to us on YouTube: youtube.com
Follow Talk Python on Mastodon: talkpython
Follow Michael on Mastodon: mkennedy